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ANGEL E. GARCIA

persons photo Title(s): Sr. Constellation Chair Biocomputaion & Bioinformatics
Professor
Department: Department of Physics, Applied Physics and Astronomy
Email: angel@rpi.edu
Phone: (518) 276-4206
Fax: (518) 276-6680
Postal Mail: Rensselaer Polytechnic Institute, 110-8th Street
(3244C Biotechnology Bldg.) Troy, NY 12180 USA

Career Highlights

García received a bachelor's and master's degree from the University of Puerto Rico and a doctorate in physics from Cornell University. He is a fellow of the American Physical Society and a member of the Biophysical Society and the American Chemical Society. He is a past elected executive board member of the American Physical Society's Division of Biological Physics; an executive committee member of the Center for Non-Linear Studies at Los Alamos National Laboratory; and a scientific board member of the Institute for Complex Adaptive Matter at the University of California.

García is a member of the editorial board of Biophysical Journal and Molecular Simulations and a member of the Faculty of 1000 for BioMed Central, an online research service that reviews the most interesting papers published in the biological sciences, based on the recommendations of a faculty of more than 1,000 selected leading researchers. He is also a past member of the scientific review committee for the National Institutes of Health (NIH) and the National Science Foundation (NSF).

Research Areas

Professor Garcia's research interests span mathematical modeling and computational analysis of problems in cellular and molecular biology as well as theoretical and computational aspects of biomolecular dynamics.

Selected Publications

  • D. Paschek, S. Gnanakaran, and A.E. Garcia, “Simulations of the Pressure and Temperature Unfolding of an Alpha Helical Peptide,” Proc. Natl. Acad. Sci. (USA) 102: 6765-6770 (2005)
  • D. Paschek and A.E. Garcia, “Reversible temperature and pressure denaturation of a protein fragment: Replica exchange molecular dynamics simulation study,” Phys. Rev. Let. 93, 238105 (2004)
  • S. Gnanakaran, Robin M. Hochstrasser and Angel E. García. “Nature of structural inhomogeneities on folding a helix and their influence on spectral measurements,” Proc. Natl. Acad. Sci. 101: 9229-9234 (2004).
  • A.E. Garcia and J.N. Onuchic, "Folding a protein in a computer; an atomic description of the folding/unfolding of protein A., " Proc. Natl. Acad. Sci. 100: 13898-13903 (2003).
  • M.S. Cheung and A.E. Garcia and J. N. Onuchic, “Protein folding mediated by solvation: water expelling and formation of the hydrophobic core occur after the structural collapse,'' Proc. Natl. Acad. Sci. (USA) 99: 685-690 (2002)
  • A.E. Garcia and K.Y. Sanbonmatsu, "Alpha helical stabilization by side chain shielding of backbone hydrogen bonds," Proc. Natl. Acad. Sci. (USA) 99: 2782-2787 (2002)
  • A.E. Garcia and K.S. Sanbonmatsu, ''Exploring the Energy Landscape of a beta hairpin in explicit solvent," Proteins, Str. Funct. & Genet. 42: 345-354 (2001)
  • G. Hummmer, S. Garde, A.E. Garcia and L.R. Pratt, “New Perspectives on Hydrophobic Effect, Chem. Phys. 258: 349-370 (2000)
  • H. Nymeyer, A.E. Garcia and J.N. Onuchic, “Folding Funnels and Frustration in Off-Lattice Minimalist Protein Landscapes," Proc. Natl. Acad. Sci. (USA), 95: 5921-5928 (1998)
  • G. Hummer, S. Garde, A.E. Garcia, M. Paulaitis and L.R. Pratt, “The Pressure Dependence of Hydrophobic Interactions is Consistent with the Observed Pressure Denaturation of Proteins," Proc. Natl. Acad. Sci. 95: 1552—1555 (1998)
  • G. Hummer, S. Garde, A.E. Garcia, A. Pohorille, and L.R. Pratt, “A Heuristic Molecular Model of Hydrophobic Interactions," Proc. Natl. Acad. Sci. 93: 8951-8955 (1996)
  • A.E. Garcia, “Large-Amplitude Non-Linear Motions in Proteins," Phys. Rev. Lett. 68: 2696-2700 (1992)

Professional Appointments

2005-present   Senior Constellation Professor for Biocomputation and Bioinformatics, Rensselaer Polytechnic Institute, Troy, NY
2001-2005 Group Leader, Theoretical Biology and Biophysics Group Theoretical Division, Los Alamos National Laboratory (LANL), Los Alamos, NM
1989-2005 Staff Member, Theoretical Biology and Biophysics Group, Theoretical Division, Los Alamos National Laboratory Los Alamos, NM

Professional Preparation

Cornell University   Theoretical Physics Ph.D. 1987
University of Puerto Rico Physics M.S. 1981
University of Puerto Rico Physics B.S. 1978
(Magna Cum Laude)